- Unify BMad directory name from 'BMad' to lowercase 'bmad'
- Use shared utility functions [getAgentsFromBmad] and [getTasksFromBmad] to fetch agents and tasks
- Create independent subdirectory structures (agents, tasks) for each module
- Update file writing paths to store TOML files by module classification
- Remove legacy QWEN.md merged documentation generation logic
- Add TOML metadata header support (not available in previous versions)
- Clean up old version configuration directories (including uppercase BMad and bmad-method)
- Remember previously configured IDEs before deleting bmad directory
- During full reinstall, treat all selected IDEs as newly selected
- Properly prompt for IDE configuration questions during reinstall
- Remove debug logging
- Fix manifest reading to use manifest.yaml instead of manifest.csv
- Show previously configured IDEs as selected by default in UI
- Skip configuration prompts for already configured IDEs during updates
- Properly collect IDE configurations during full reinstall
- Handle installation cancellation without throwing errors