tools/audit-file-refs.md — a repeatable prompt that spawns parallel
Haiku subagents to semantically audit new-format source files for
non-conforming file references. Includes a self-check that verifies
all files are accounted for before producing the final report.
Replaces the planned regex extension (Item 1 of the master plan) with
an approach that can handle the full surface area of reference patterns
without exhaustive pattern enumeration.
Also excludes .junie/ from Prettier checks (IDE integration folder,
user-specific, not in repo).
Refs #1718
Co-authored-by: Brian <bmadcode@gmail.com>